Protein ZmMADS56
ZmMADS56 is a protein in the MADS family.
Information
TF Name: ZmMADS56
Species: Maize
TF Family: MADS
Gene Name(Synonym): ZAG6
Uniprot ID: A0A1D6PDQ1

Protein ZmMADS56

ZmMADS56 is a protein in the MADS family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d027425DAPseq no logo sequence fimo position
Zm00001d027425DAPseq no logo sequence fimo position
Zm00001d027425ChIPseq no logo sequence fimo position
Zm00001d027425PChIPseq no logo sequence fimo position

Interactions where ZmMADS56 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmMADS56 is the target  
Expand


There are 118 protein-dna interactions that fit this criteria. download excel sheet

GRMZM2G026223_T01 from maize genome v3


Related TFome: pUT5425

Amino Acid Sequence
Copy to clipboard

MVRGKTQMKRIENPASRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TAHQDIEQVKADAEGLAKKLEALEAYKRKLLGERLEECSFEELHSLEVKLEKSLHCIRGRKTQLLEEQLHKLKEKEMNLR
KSNEDLREKVMGAKTFCRRCTAASGMPTTQENRL

MVRGKTQMKRIENPASRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TAHQDIEQVKADAEGLAKKLEALEAYKRKLLGERLEECSFEELHSLEVKLEKSLHCIRGRKTQLLEEQLHKLKEKEMNLR
KSNEDLREKVMGAKTFCRRCTAASGMPTTQENRL

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available

Nucleotide Sequence
Copy to clipboard
     
Expand

ATATACCCTTTCGTCTCCGCCCAGC...

GRMZM2G026223_T02 from maize genome v3

Amino Acid Sequence
Copy to clipboard

MVRGKTQMKRIENPASRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TAHQDIEQVKADAEGLAKKLEALEAYKRKLLGERLEECSFEELHSLEVKLEKSLHCIRGRKTQLLEEQLHKLKEKEMNLR
KSNEDLREKVMGAKTFCRRCTAASGMPTTQENSARSSRRRRRLC

Nucleotide Sequence
Copy to clipboard
     
Expand

ATATACCCTTTCGTCTCCGCCCAGC...

GRMZM2G026223_T03 from maize genome v3

Amino Acid Sequence
Copy to clipboard

MVRGKTQMKRIENPASRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TAHQDIEQVKADAEGLAKKLEALEAYKRKLLGERLEECSFEELHSLEVKLEKSLHCIRGRKTQLLEEQLHKLKEKEMNLR
KSNEDLREKVMGAKTFCRRCTAASGMPTTQENRL

Nucleotide Sequence
Copy to clipboard
     
Expand

ATATACCCTTTCGTCTCCGCCCAGC...

GRMZM2G026223_T04 from maize genome v3

Amino Acid Sequence
Copy to clipboard

MVRGKTQMKRIENPASRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TAHQDIEQVKADAEGLAKKLEALEAYKRKLLGERLEECSFEELHSLEVKLEKSLHCIRGRKTQLLEEQLHKLKEKEMNLR
KSNEDLREKCKKQPPPPPPMLMAPPPPPAPAAIDHTGPKDVGMDVETELYIGLPGRDYRSNNKDMTAQ

Nucleotide Sequence
Copy to clipboard
     
Expand

ATATACCCTTTCGTCTCCGCCCAGC...

GRMZM2G026223_T05 from maize genome v3

Amino Acid Sequence
Copy to clipboard

MVRGKTQMKRIENPASRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TAHQDIEQVKADAEGLAKKLEALEAYKRKLLGERLEECSFEELHSLEVKLEKSLHCIRGRKCKKQPPPPPPMLMAPPPPP
APAAIDHTGPKDVGMDVETELYIGLPGRDYRSNNKDMTAQ

Nucleotide Sequence
Copy to clipboard
     
Expand

ATATACCCTTTCGTCTCCGCCCAGC...

GRMZM2G026223_T06 from maize genome v3

Amino Acid Sequence
Copy to clipboard

MVRGKTQMKRIENPASRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TAHQDIEQVKADAEGLAKKLEALEAYKRKLLGERLEECSFEELHSLEVKLEKSLHCIRGRKTQLLEEQLHKLKEKEMNLR
KSNEDLREKCKKQPPPPPPMLMAPPPPPAPAAIDHTGPKDVGMDVETELYIGLPGRDYRSNNKDMTAQ

Nucleotide Sequence
Copy to clipboard
     
Expand

ATATACCCTTTCGTCTCCGCCCAGC...

GRMZM2G026223_T07 from maize genome v3

Amino Acid Sequence
Copy to clipboard

MVRGKTQMKRIENPASRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TAHQDIEQVKADAEGLAKKLEALEAYKRKLLGERLEECSFEELHSLEVKLEKSLHCIRGRKVSYFPHVVLCIQYMYDVLT
NELKAAYIHMRIWSYVHGRLSCWRSNSIS

Nucleotide Sequence
Copy to clipboard
     
Expand

ATATACCCTTTCGTCTCCGCCCAGC...

Zm00001d027425_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MVRGKTQMKRIENPASRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TAHQDIEQVKADAEGLAKKLEALEAYKRKLLGERLEECSFEELHSLEVKLEKSLHCIRGRKTQLLEEQLHKLKEKEMNLR
KSNEDLREKCKKQPPPPPPMLMAPPPPPAPAAIDHTGPKDVGMDVETELYIGLPGRDYRSNNKDMTAQ

Nucleotide Sequence
Copy to clipboard
     
Expand

ATATACCCTTTCGTCTCCGCCCAGC...

Zm00001d027425_T002 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MVRGKTQMKRIENPASRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TAHQDIEQVKADAEGLAKKLEALEAYKRKLLGERLEECSFEELHSLEVKLEKSLHCIRGRKVSYFPHVVLCIQYMYDVLT
NELKAAYIHMRIWSYVHGRLSCWRSNSIS

Nucleotide Sequence
Copy to clipboard
     
Expand

ACCCACCGAATCCGCCCCTCCCTCT...

Zm00001eb001670_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MVRGKTQMKRIENPASRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TAHQDIEQVKADAEGLAKKLEALEAYKRKLLGERLEECSFEELHSLEVKLEKSLHCIRGRKCKKQPPPPPPMLMAPPPPP
APAAIDHTGPKDVGMDVETELYIGLPGRDYRSNNKDMTAQ

Nucleotide Sequence
Copy to clipboard
     
Expand

CCCTCAACGAGCAGGACCAGGCGTC...

Zm00001eb001670_T002 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MVRGKTQMKRIENPASRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TAHQDIEQVKADAEGLAKKLEALEAYKRKLLGERLEECSFEELHSLEVKLEKSLHCIRGRKTQLLEEQLHKLKEKEMNLR
KSNEDLREKQPPPPPPMLMAPPPPPAPAAIDHTGPKDVGMDVETELYIGLPGRDYRSNNKDMTAQ

Nucleotide Sequence
Copy to clipboard
     
Expand

CCCTCAACGAGCAGGACCAGGCGTC...

Zm00001eb001670_T003 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MVRGKTQMKRIENPASRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TAHQDIEQVKADAEGLAKKLEALEAYKRKLLGERLEECSFEELHSLEVKLEKSLHCIRGRKTQLLEEQLHKLKEKEMNLR
KSNEDLREKQPPPPPPMLMAPPPPPAPAAIDHTGPKDVGMDVETELYIGLPGRDYRSNNKDMTAQ

Nucleotide Sequence
Copy to clipboard
     
Expand

CCCTCAACGAGCAGGACCAGGCGTC...

Zm00001eb001670_T004 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MVRGKTQMKRIENPASRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TAHQDIEQVKADAEGLAKKLEALEAYKRKLLGERLEECSFEELHSLEVKLEKSLHCIRGRKTQLLEEQLHKLKEKEMNLR
KSNEDLREKVMGAKTFCRRCTAASGMPTTQENRL

Nucleotide Sequence
Copy to clipboard
     
Expand

CCCTCAACGAGCAGGACCAGGCGTC...

Zm00001eb001670_T005 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MVRGKTQMKRIENPASRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TAHQDIEQVKADAEGLAKKLEALEAYKRKLLGERLEECSFEELHSLEVKLEKSLHCIRGRKTQLLEEQLHKLKEKEMNLR
KSNEDLREKCKKQPPPPPPMLMAPPPPPAPAAIDHTGPKDVGMDVETELYIGLPGRDYRSNNKDMTAQ

Nucleotide Sequence
Copy to clipboard
     
Expand

ATATACCCTTTCGTCTCCGCCCAGC...

Zm00001eb001670_T006 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MVRGKTQMKRIENPASRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TAHQDIEQVKADAEGLAKKLEALEAYKRKLLGERLEECSFEELHSLEVKLEKSLHCIRGRKTQLLEEQLHKLKEKEMNLR
KSNEDLREKCKKQPPPPPPMLMAPPPPPAPAAIDHTGPKDVGMDVETELYIGLPGRDYRSNNKDMTAQ

Nucleotide Sequence
Copy to clipboard
     
Expand

ATACCCTTTCGTCTCCGCCCAGCAG...


Copyright © 2023 Grassius.org | Last updated: 2023-06-26